combine@alvar.ug

Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi

Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi

Show simple record

dc.contributor.author Mbewe, Willard
dc.contributor.author Winter, Stephan
dc.contributor.author Mukasa, Settumba
dc.contributor.author Tairo, Fred
dc.contributor.author Sseruwagi, Peter
dc.contributor.author Ndunguru, Joseph
dc.contributor.author Duffy, Siobain
dc.date.accessioned 2021-01-01T21:58:09Z
dc.date.available 2021-01-01T21:58:09Z
dc.date.issued 2017
dc.identifier.issn 2576-098X
dc.identifier.uri http://combine.alvar.ug/handle/1/48187
dc.description.abstract Illumina sequencing of RNA from a cassava cutting from northern Malawi produced a genome of Ugandan cassava brown streak virus (UCBSV-MW-NB7_2013). Sequence comparisons revealed stronger similarity to an isolate from nearby Tanzania (93.4% pairwise nucleotide identity) than to those previously reported from Malawi (86.9 to 87.0%).
dc.description.sponsorship Bill & Melinda Gates FoundationBill & Melinda Gates Foundation [51466, 1052391]
dc.description.sponsorship UK Department for International Development, under Mikocheni Agricultural Research Institute through the Disease Diagnostics for Sustainable Cassava Production in Africa project
dc.language English
dc.publisher AMER SOC MICROBIOLOGY
dc.relation.ispartof Microbiology Resource Announcements
dc.title Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
dc.type Article
dc.identifier.isi 000460708600024
dc.identifier.doi 10.1128/genomeA.00818-17
dc.identifier.pmid 288188
dc.publisher.city WASHINGTON
dc.publisher.address 1752 N ST NW, WASHINGTON, DC 20036-2904 USA
dc.identifier.volume 5
dc.identifier.issue 33
dc.subject.wc Microbiology
dc.subject.sc Microbiology
dc.description.oa Other Gold
dc.description.oa Green Published
dc.description.pages 2
dc.identifier.articleno e00818-17
dc.description.affiliation Rutgers State Univ, Dept Ecol Evolut & Nat Resources, New Brunswick, NJ 08854 USA
dc.description.affiliation Makerere Univ, Sch Agr Sci, Kampala, Uganda
dc.description.affiliation Leibniz Inst, DSMZ Plant Virus Dept, Braunschweig, Germany
dc.description.affiliation Mikocheni Agr Res Inst, Dar Es Salaam, Tanzania
dc.description.affiliation Bvumbwe Agr Res Stn, Dept Agr Res Serv, Limbe, Malawi
dc.description.email mbewewillard@yahoo.co.uk
dc.description.corr Mbewe, W (corresponding author), Rutgers State Univ, Dept Ecol Evolut & Nat Resources, New Brunswick, NJ 08854 USA.; Mbewe, W (corresponding author), Makerere Univ, Sch Agr Sci, Kampala, Uganda.; Mbewe, W (corresponding author), Bvumbwe Agr Res Stn, Dept Agr Res Serv, Limbe, Malawi.
dc.description.orcid Duffy, Siobain/0000-0003-0753-223X


This record appears in the collections of the following institution(s)

Show simple record

Search Entire Database


Browse

My Account