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Multicountry Validation of SAMBA - A Novel Molecular Point-of-Care Test for HIV-1 Detection in Resource-Limited Setting

Multicountry Validation of SAMBA - A Novel Molecular Point-of-Care Test for HIV-1 Detection in Resource-Limited Setting

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dc.contributor.author Ondiek, Johnson
dc.contributor.author Namukaya, Zikulah
dc.contributor.author Mtapuri-Zinyowera, Sekesai
dc.contributor.author Balkan, Suna
dc.contributor.author Elbireer, Ali
dc.contributor.author Lumb, Ines Ushiro
dc.contributor.author Kiyaga, Charles
dc.contributor.author Goel, Neha
dc.contributor.author Ritchie, Allyson
dc.contributor.author Ncube, Patience
dc.contributor.author Omuomu, Kenneth
dc.contributor.author Ndiege, Kenneth
dc.contributor.author Kekitiinwa, Adeodata
dc.contributor.author Mangwanya, Douglas
dc.contributor.author Fowler, Mary G.
dc.contributor.author Nadala, Lou
dc.contributor.author Lee, Helen
dc.date.accessioned 2021-01-01T21:57:48Z
dc.date.available 2021-01-01T21:57:48Z
dc.date.issued 2017
dc.identifier.issn 1525-4135
dc.identifier.uri http://combine.alvar.ug/handle/1/48017
dc.description.abstract Introduction: Early diagnosis of HIV-1 infection and the prompt initiation of antiretroviral therapy are critical to achieving a reduction in the morbidity and mortality of infected infants. The Simple AMplification-Based Assay (SAMBA) HIV-1 Qual Whole Blood Test was developed specifically for early infant diagnosis and prevention of mother-to-child transmission programs implemented at the point-of-care in resource-limited settings. Methods: We have evaluated the performance of this test run on the SAMBA I semiautomated platform with fresh whole blood specimens collected from 202 adults and 745 infants in Kenya, Uganda, and Zimbabwe. Results were compared with those obtained with the Roche COBAS AmpliPrep/COBAS TaqMan (CAP/CTM) HIV-1 assay as performed with fresh whole blood or dried blood spots of the same subjects, and discrepancies were resolved with alternative assays. Results: The performance of the SAMBA and CAP/CTM assays evaluated at 5 laboratories in the 3 countries was similar for both adult and infant samples. The clinical sensitivity, specificity, positive predictive value, and negative predictive value for the SAMBA test were 100%, 99.2%, 98.7%, and 100%, respectively, with adult samples, and 98.5%, 99.8%, 99.7%, and 98.8%, respectively, with infant samples. Discussion: Our data suggest that the SAMBA HIV-1 Qual Whole Blood Test would be effective for early diagnosis of HIV-1 infection in infants at point-of-care settings in sub-Saharan Africa.
dc.description.sponsorship Children Investment Fund Foundation (CIFF)
dc.description.sponsorship UNITAID
dc.language English
dc.publisher LIPPINCOTT WILLIAMS & WILKINS
dc.relation.ispartof Jaids-Journal of Acquired Immune Deficiency Syndromes
dc.subject Hiv-1
dc.subject Point-Of-Care
dc.subject Early Infant Diagnosis
dc.subject Nucleic Acid Test
dc.title Multicountry Validation of SAMBA - A Novel Molecular Point-of-Care Test for HIV-1 Detection in Resource-Limited Setting
dc.type Article
dc.identifier.isi 000416133000003
dc.identifier.pmid 2826
dc.publisher.city PHILADELPHIA
dc.publisher.address TWO COMMERCE SQ, 2001 MARKET ST, PHILADELPHIA, PA 19103 USA
dc.identifier.eissn 1077-9450
dc.identifier.volume 76
dc.identifier.issue 2
dc.identifier.spage E52
dc.identifier.epage E57
dc.subject.wc Immunology
dc.subject.wc Infectious Diseases
dc.subject.sc Immunology
dc.subject.sc Infectious Diseases
dc.description.oa Green Published
dc.description.pages 6
dc.subject.kwp Dried Blood Spots
dc.subject.kwp Real-Time Pcr
dc.subject.kwp Early-Diagnosis
dc.subject.kwp Whole-Blood
dc.subject.kwp P24 Antigen
dc.subject.kwp Infection
dc.subject.kwp Assay
dc.subject.kwp Performance
dc.subject.kwp Infants
dc.subject.kwp Africa
dc.description.affiliation US CDC Res & Publ Hlth Collaborat KEMRI CDC, Kenya Med Res Inst, Kisumu, Kenya
dc.description.affiliation Makerere Univ, Johns Hopkins Univ Res Collaborat, Kampala, Uganda
dc.description.affiliation Natl Microbiol Reference Lab, Harare, Zimbabwe
dc.description.affiliation Med Sans Frontieres, Paris, France
dc.description.affiliation African Soc Lab Med, Addis Ababa, Ethiopia
dc.description.affiliation Johns Hopkins Univ, Sch Med, Baltimore, MD USA
dc.description.affiliation NHS Blood & Transplant, London, England
dc.description.affiliation Minist Hlth, Cent Publ Hlth Lab, Kampala, Uganda
dc.description.affiliation Univ Cambridge, Dept Haematol, Diagnost Dev Unit, Chesterford Res Pk, Great Chesterford CB10 1XL, England
dc.description.affiliation Mulago Hosp, Baylor Uganda, Paediat Infect Dis Clin, Kampala, Uganda
dc.description.affiliation Minist Hlth & Child Care, Harare, Zimbabwe
dc.description.affiliation Diagnost Real World Ltd, Sunnyvale, CA USA
dc.description.email hl207@cam.ac.uk
dc.description.corr Lee, H (corresponding author), Univ Cambridge, Dept Haematol, Diagnost Dev Unit, Chesterford Res Pk, Great Chesterford CB10 1XL, England.
dc.description.orcid Elbireer, Ali/0000-0002-2513-3497
dc.description.orcid Goel, Neha/0000-0002-2820-9186


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